IL_9F1B_014

3D structure

PDB id

9F1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

GUACUU*AUGCCGAC

Length

14 nucleotides

Bulged bases

9F1B|1|A2|C|142, 9F1B|1|A2|U|143

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1B|1|A2|G|130
9F1B|1|A2|U|140
9F1B|1|A2|A|141
9F1B|1|A2|C|142
9F1B|1|A2|U|143
9F1B|1|A2|U|144
*
9F1B|1|A2|A|175
9F1B|1|A2|U|176
9F1B|1|A2|G|177
9F1B|1|A2|C|178
9F1B|1|A2|C|179
9F1B|1|A2|G|180
9F1B|1|A2|A|181
9F1B|1|A2|C|182

Current chains

Chain A2

18S rRNA

Nearby chains

Chain Af

40S ribosomal protein S6