IL_9F1B_017
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- CUGAC*GGA(PSU)G
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1B_017 not in the Motif Atlas
- Geometric match to IL_4WFL_001
- Geometric discrepancy: 0.269
- The information below is about IL_4WFL_001
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
9F1B|1|A2|C|188
9F1B|1|A2|U|189
9F1B|1|A2|G|190
9F1B|1|A2|A|191
9F1B|1|A2|C|192
*
9F1B|1|A2|G|207
9F1B|1|A2|G|208
9F1B|1|A2|A|209
9F1B|1|A2|PSU|210
9F1B|1|A2|G|211
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain Ah
- 40S ribosomal protein S8
Coloring options: