IL_9F1B_023
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- GGG*CGAU(OMU)C
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1B_023 not in the Motif Atlas
- Homologous match to IL_8C3A_412
- Geometric discrepancy: 0.1351
- The information below is about IL_8C3A_412
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49054.1
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
9F1B|1|A2|G|412
9F1B|1|A2|G|413
9F1B|1|A2|G|414
*
9F1B|1|A2|C|425
9F1B|1|A2|G|426
9F1B|1|A2|A|427
9F1B|1|A2|U|428
9F1B|1|A2|OMU|429
9F1B|1|A2|C|430
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain Ad
- 40S ribosomal protein S4
- Chain Ai
- 40S ribosomal protein S9
- Chain Aw
- 40S ribosomal protein S23
Coloring options: