IL_9F1B_036

3D structure

PDB id

9F1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

GUU(A2M)AAA*UC

Length

9 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9F1B_036 not in the Motif Atlas

Homologous match to IL_8C3A_426

Geometric discrepancy: 0.1516

The information below is about IL_8C3A_426

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.4

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

5

Unit IDs

9F1B|1|A2|G|666
9F1B|1|A2|U|667
9F1B|1|A2|U|668
9F1B|1|A2|A2M|669
9F1B|1|A2|A|670
9F1B|1|A2|A|671
9F1B|1|A2|A|672
*
9F1B|1|A2|U|1162
9F1B|1|A2|C|1163

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AE

Small ribosomal subunit protein eS26

Chain Aw

40S ribosomal protein S23