IL_9F1B_058
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- CGA*UCUUUGG
- Length
- 10 nucleotides
- Bulged bases
- 9F1B|1|A2|C|1154, 9F1B|1|A2|U|1156, 9F1B|1|A2|G|1158
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1B_058 not in the Motif Atlas
- Homologous match to IL_8C3A_443
- Geometric discrepancy: 0.0994
- The information below is about IL_8C3A_443
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47729.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9F1B|1|A2|C|1092
9F1B|1|A2|G|1093
9F1B|1|A2|A|1094
*
9F1B|1|A2|U|1153
9F1B|1|A2|C|1154
9F1B|1|A2|U|1155
9F1B|1|A2|U|1156
9F1B|1|A2|U|1157
9F1B|1|A2|G|1158
9F1B|1|A2|G|1159
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AA
- 40S ribosomal protein S27
- Chain Ab
- 40S ribosomal protein S2
- Chain Ak
- 40S ribosomal protein S11
- Chain Am
- 40S ribosomal protein S13
- Chain Av
- Ribosomal protein S15a
- Chain Aw
- 40S ribosomal protein S23
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