IL_9F1B_165

3D structure

PDB id

9F1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

CC(OMG)A(A2M)AG*CUAGUAGCUG

Length

17 nucleotides

Bulged bases

9F1B|1|B5|A|1605, 9F1B|1|B5|G|1609

QA status

Modified nucleotides: OMG, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1B|1|B5|C|1475
9F1B|1|B5|C|1476
9F1B|1|B5|OMG|1477
9F1B|1|B5|A|1478
9F1B|1|B5|A2M|1479
9F1B|1|B5|A|1480
9F1B|1|B5|G|1481
*
9F1B|1|B5|C|1603
9F1B|1|B5|U|1604
9F1B|1|B5|A|1605
9F1B|1|B5|G|1606
9F1B|1|B5|U|1607
9F1B|1|B5|A|1608
9F1B|1|B5|G|1609
9F1B|1|B5|C|1610
9F1B|1|B5|U|1611
9F1B|1|B5|G|1612

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BC

60S ribosomal protein L4

Chain BL

Large ribosomal subunit protein eL13

Chain BN

Ribosomal protein L15

Chain Ba

60S ribosomal protein L27a

Chain Bj

Ribosomal protein L37