IL_9F1B_172
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- UUU*A(PSU)A
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1B_172 not in the Motif Atlas
- Homologous match to IL_5TBW_034
- Geometric discrepancy: 0.0792
- The information below is about IL_5TBW_034
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
9F1B|1|B5|U|1626
9F1B|1|B5|U|1627
9F1B|1|B5|U|1628
*
9F1B|1|B5|A|1637
9F1B|1|B5|PSU|1638
9F1B|1|B5|A|1639
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BL
- Large ribosomal subunit protein eL13
- Chain BQ
- Large ribosomal subunit protein eL18
- Chain BT
- 60S ribosomal protein L21
- Chain Ba
- 60S ribosomal protein L27a
- Chain Bb
- 60S ribosomal protein L29
Coloring options: