3D structure

PDB id
9F1B (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
Experimental method
ELECTRON MICROSCOPY
Resolution
3.01 Å

Loop

Sequence
CUCGCAACCCCG*CG
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9F1B|1|B5|C|1649
9F1B|1|B5|U|1650
9F1B|1|B5|C|1651
9F1B|1|B5|G|1652
9F1B|1|B5|C|1653
9F1B|1|B5|A|1654
9F1B|1|B5|A|1655
9F1B|1|B5|C|1656
9F1B|1|B5|C|1657
9F1B|1|B5|C|1658
9F1B|1|B5|C|1659
9F1B|1|B5|G|1660
*
9F1B|1|B5|C|1780
9F1B|1|B5|G|1781

Current chains

Chain B5
28S rRNA

Nearby chains

Chain BC
60S ribosomal protein L4
Chain BF
Ribosomal Protein uL30
Chain BQ
Large ribosomal subunit protein eL18
Chain BT
60S ribosomal protein L21
Chain Bb
60S ribosomal protein L29

Coloring options:

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