IL_9F1B_176

3D structure

PDB id

9F1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

CGGUAAA*UU(PSU)AAAUG

Length

15 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1B|1|B5|C|1671
9F1B|1|B5|G|1672
9F1B|1|B5|G|1673
9F1B|1|B5|U|1674
9F1B|1|B5|A|1675
9F1B|1|B5|A|1676
9F1B|1|B5|A|1677
*
9F1B|1|B5|U|1729
9F1B|1|B5|U|1730
9F1B|1|B5|PSU|1731
9F1B|1|B5|A|1732
9F1B|1|B5|A|1733
9F1B|1|B5|A|1734
9F1B|1|B5|U|1735
9F1B|1|B5|G|1736

Current chains

Chain B5

28S rRNA

Nearby chains

Chain B

Large ribosomal subunit protein uL18

Chain B7

5S ribosomal RNA; 5S rRNA

Chain BF

Ribosomal Protein uL30

Chain BI

60S ribosomal protein L10

Chain BT

60S ribosomal protein L21