IL_9F1B_250
3D structure
- PDB id
- 9F1B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.01 Å
Loop
- Sequence
- GA*UAC
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1B_250 not in the Motif Atlas
- Homologous match to IL_8C3A_107
- Geometric discrepancy: 0.1186
- The information below is about IL_8C3A_107
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
9F1B|1|B5|G|3937
9F1B|1|B5|A|3938
*
9F1B|1|B5|U|3948
9F1B|1|B5|A|3949
9F1B|1|B5|C|3950
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain AT
- P-site tRNA
- Chain BI
- 60S ribosomal protein L10
- Chain BT
- 60S ribosomal protein L21
- Chain Bb
- 60S ribosomal protein L29
- Chain Bo
- Large ribosomal subunit protein eL42
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