3D structure

PDB id
9F1B (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
Experimental method
ELECTRON MICROSCOPY
Resolution
3.01 Å

Loop

Sequence
UCGUACG*UUGAAA
Length
13 nucleotides
Bulged bases
9F1B|1|B5|G|4780
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9F1B|1|B5|U|4742
9F1B|1|B5|C|4743
9F1B|1|B5|G|4744
9F1B|1|B5|U|4745
9F1B|1|B5|A|4746
9F1B|1|B5|C|4747
9F1B|1|B5|G|4748
*
9F1B|1|B5|U|4778
9F1B|1|B5|U|4779
9F1B|1|B5|G|4780
9F1B|1|B5|A|4781
9F1B|1|B5|A|4782
9F1B|1|B5|A|4783

Current chains

Chain B5
28S rRNA

Nearby chains

Chain BB
Ribosomal protein L3
Chain BW
Ribosomal protein L24
Chain Bd
60S ribosomal protein L31

Coloring options:

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