IL_9F1C_055
3D structure
- PDB id
- 9F1C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.78 Å
Loop
- Sequence
- AGG(PSU)(PSU)C*GUU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1C_055 not in the Motif Atlas
- Geometric match to IL_4V88_435
- Geometric discrepancy: 0.1551
- The information below is about IL_4V88_435
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_22046.1
- Basepair signature
- cWW-L-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
9F1C|1|A2|A|1043
9F1C|1|A2|G|1044
9F1C|1|A2|G|1045
9F1C|1|A2|PSU|1046
9F1C|1|A2|PSU|1047
9F1C|1|A2|C|1048
*
9F1C|1|A2|G|1072
9F1C|1|A2|U|1073
9F1C|1|A2|U|1074
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AE
- Small ribosomal subunit protein eS26
- Chain An
- Small ribosomal subunit protein uS11
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
- Chain BA
- Large ribosomal subunit protein uL2
- Chain Bp
- 60S ribosomal protein L37a
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