IL_9F1C_056
3D structure
- PDB id
- 9F1C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.78 Å
Loop
- Sequence
- CGAAG*CGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1C_056 not in the Motif Atlas
- Homologous match to IL_8C3A_442
- Geometric discrepancy: 0.0932
- The information below is about IL_8C3A_442
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.5
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
9F1C|1|A2|C|1048
9F1C|1|A2|G|1049
9F1C|1|A2|A|1050
9F1C|1|A2|A|1051
9F1C|1|A2|G|1052
*
9F1C|1|A2|C|1068
9F1C|1|A2|G|1069
9F1C|1|A2|U|1070
9F1C|1|A2|A|1071
9F1C|1|A2|G|1072
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AE
- Small ribosomal subunit protein eS26
- Chain An
- Small ribosomal subunit protein uS11
- Chain B5
- Large subunit ribosomal RNA; LSU rRNA
- Chain BA
- Large ribosomal subunit protein uL2
Coloring options: