IL_9F1C_178

3D structure

PDB id

9F1C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.78 Å

Loop

Sequence

GAUUAGAG*C(PSU)A(PSU)(PSU)CUC

Length

16 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1C|1|B5|G|1684
9F1C|1|B5|A|1685
9F1C|1|B5|U|1686
9F1C|1|B5|U|1687
9F1C|1|B5|A|1688
9F1C|1|B5|G|1689
9F1C|1|B5|A|1690
9F1C|1|B5|G|1691
*
9F1C|1|B5|C|1717
9F1C|1|B5|PSU|1718
9F1C|1|B5|A|1719
9F1C|1|B5|PSU|1720
9F1C|1|B5|PSU|1721
9F1C|1|B5|C|1722
9F1C|1|B5|U|1723
9F1C|1|B5|C|1724

Current chains

Chain B5

28S rRNA

Nearby chains

Chain B

Large ribosomal subunit protein uL18

Chain B7

5S ribosomal RNA; 5S rRNA

Chain BI

60S ribosomal protein L10