IL_9F1C_374

3D structure

PDB id

9F1C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.78 Å

Loop

Sequence

ACA*UUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9F1C_374 not in the Motif Atlas

Homologous match to IL_8P9A_436

Geometric discrepancy: 0.2491

The information below is about IL_8P9A_436

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38565.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

12

Unit IDs

9F1C|1|A2|A|1292
9F1C|1|A2|C|1293
9F1C|1|A2|A|1294
*
9F1C|1|A2|U|1307
9F1C|1|A2|U|1308
9F1C|1|A2|U|1309

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AC

Ribosomal protein S27a

Chain AG

40S ribosomal protein S29