IL_9F1D_013

3D structure

PDB id

9F1D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK

Experimental method

ELECTRON MICROSCOPY

Resolution

3.26 Å

Loop

Sequence

GUACUU*AUGCCGAC

Length

14 nucleotides

Bulged bases

9F1D|1|A2|C|142, 9F1D|1|A2|U|143

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1D|1|A2|G|130
9F1D|1|A2|U|140
9F1D|1|A2|A|141
9F1D|1|A2|C|142
9F1D|1|A2|U|143
9F1D|1|A2|U|144
*
9F1D|1|A2|A|175
9F1D|1|A2|U|176
9F1D|1|A2|G|177
9F1D|1|A2|C|178
9F1D|1|A2|C|179
9F1D|1|A2|G|180
9F1D|1|A2|A|181
9F1D|1|A2|C|182

Current chains

Chain A2

18S rRNA

Nearby chains

Chain Af

40S ribosomal protein S6

Chain BW

Ribosomal protein L24