IL_9F1D_014

3D structure

PDB id

9F1D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK

Experimental method

ELECTRON MICROSCOPY

Resolution

3.26 Å

Loop

Sequence

UGGAUAAC*GCUAA(OMU)A(OMC)A

Length

17 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU, OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1D|1|A2|U|144
9F1D|1|A2|G|145
9F1D|1|A2|G|146
9F1D|1|A2|A|147
9F1D|1|A2|U|148
9F1D|1|A2|A|149
9F1D|1|A2|A|150
9F1D|1|A2|C|151
*
9F1D|1|A2|G|167
9F1D|1|A2|C|168
9F1D|1|A2|U|169
9F1D|1|A2|A|170
9F1D|1|A2|A|171
9F1D|1|A2|OMU|172
9F1D|1|A2|A|173
9F1D|1|A2|OMC|174
9F1D|1|A2|A|175

Current chains

Chain A2

18S rRNA

Nearby chains

Chain Af

40S ribosomal protein S6

Chain Ax

40S ribosomal protein S24

Chain BW

Ribosomal protein L24