IL_9F1D_043

3D structure

PDB id

9F1D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK

Experimental method

ELECTRON MICROSCOPY

Resolution

3.26 Å

Loop

Sequence

U(PSU)AC*GAA(PSU)AA

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1D|1|A2|U|801
9F1D|1|A2|PSU|802
9F1D|1|A2|A|803
9F1D|1|A2|C|804
*
9F1D|1|A2|G|861
9F1D|1|A2|A|862
9F1D|1|A2|A|863
9F1D|1|A2|PSU|864
9F1D|1|A2|A|865
9F1D|1|A2|A|866

Current chains

Chain A2

18S rRNA

Nearby chains

Chain Ag

40S ribosomal protein S7

Chain Ak

40S ribosomal protein S11

Chain Av

Ribosomal protein S15a

Chain Aw

40S ribosomal protein S23