IL_9F1D_045

3D structure

PDB id

9F1D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK

Experimental method

ELECTRON MICROSCOPY

Resolution

3.26 Å

Loop

Sequence

GAAAAAA(PSU)(PSU)A*UACCGCAGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1D|1|A2|G|808
9F1D|1|A2|A|809
9F1D|1|A2|A|810
9F1D|1|A2|A|811
9F1D|1|A2|A|812
9F1D|1|A2|A|813
9F1D|1|A2|A|814
9F1D|1|A2|PSU|815
9F1D|1|A2|PSU|816
9F1D|1|A2|A|817
*
9F1D|1|A2|U|849
9F1D|1|A2|A|850
9F1D|1|A2|C|851
9F1D|1|A2|C|852
9F1D|1|A2|G|853
9F1D|1|A2|C|854
9F1D|1|A2|A|855
9F1D|1|A2|G|856
9F1D|1|A2|C|857

Current chains

Chain A2

18S rRNA

Nearby chains

Chain Ad

40S ribosomal protein S4

Chain Ai

40S ribosomal protein S9

Chain Ak

40S ribosomal protein S11

Chain Av

Ribosomal protein S15a