IL_9F1D_071
3D structure
- PDB id
- 9F1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.26 Å
Loop
- Sequence
- GACA*UUUC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1D_071 not in the Motif Atlas
- Geometric match to IL_3WBM_003
- Geometric discrepancy: 0.3886
- The information below is about IL_3WBM_003
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
9F1D|1|A2|G|1291
9F1D|1|A2|A|1292
9F1D|1|A2|C|1293
9F1D|1|A2|A|1294
*
9F1D|1|A2|U|1307
9F1D|1|A2|U|1308
9F1D|1|A2|U|1309
9F1D|1|A2|C|1310
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AC
- Ribosomal protein S27a
- Chain AG
- 40S ribosomal protein S29
- Chain Aj
- S10_plectin domain-containing protein
- Chain Al
- 40S ribosomal protein S12
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