IL_9F1D_141

3D structure

PDB id

9F1D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK

Experimental method

ELECTRON MICROSCOPY

Resolution

3.26 Å

Loop

Sequence

AAGG*CAGCAGCAGCU

Length

15 nucleotides

Bulged bases

9F1D|1|B5|A|831, 9F1D|1|B5|C|836

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1D|1|B5|A|726
9F1D|1|B5|A|727
9F1D|1|B5|G|728
9F1D|1|B5|G|729
*
9F1D|1|B5|C|827
9F1D|1|B5|A|828
9F1D|1|B5|G|829
9F1D|1|B5|C|830
9F1D|1|B5|A|831
9F1D|1|B5|G|832
9F1D|1|B5|C|833
9F1D|1|B5|A|834
9F1D|1|B5|G|835
9F1D|1|B5|C|836
9F1D|1|B5|U|837

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BC

60S ribosomal protein L4

Chain BM

60S ribosomal protein L14

Chain BS

Large ribosomal subunit protein eL20