IL_9F1D_213
3D structure
- PDB id
- 9F1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.26 Å
Loop
- Sequence
- CG*CGG
- Length
- 5 nucleotides
- Bulged bases
- 9F1D|1|B5|G|2554
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1D_213 not in the Motif Atlas
- Homologous match to IL_8GLP_102
- Geometric discrepancy: 0.2044
- The information below is about IL_8GLP_102
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_28408.5
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 83
Unit IDs
9F1D|1|B5|C|2547
9F1D|1|B5|G|2548
*
9F1D|1|B5|C|2553
9F1D|1|B5|G|2554
9F1D|1|B5|G|2555
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BR
- Ribosomal protein L19
- Chain BU
- 60S ribosomal protein L22
- Chain BX
- Large ribosomal subunit protein uL23
- Chain Cu
- Transcription factor BTF3
- Chain EA
- Methionine aminopeptidase 1
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