IL_9F1D_263

3D structure

PDB id

9F1D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK

Experimental method

ELECTRON MICROSCOPY

Resolution

3.26 Å

Loop

Sequence

UUG*CCAAG

Length

8 nucleotides

Bulged bases

9F1D|1|B5|A|4234

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1D|1|B5|U|4214
9F1D|1|B5|U|4215
9F1D|1|B5|G|4216
*
9F1D|1|B5|C|4231
9F1D|1|B5|C|4232
9F1D|1|B5|A|4233
9F1D|1|B5|A|4234
9F1D|1|B5|G|4235

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BH

60S ribosomal protein L9

Chain BO

Large ribosomal subunit protein uL13

Chain Bm

Ubiquitin-ribosomal protein eL40 fusion protein