IL_9F1D_274

3D structure

PDB id

9F1D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK

Experimental method

ELECTRON MICROSCOPY

Resolution

3.26 Å

Loop

Sequence

A(OMG)ACAU(PSU)U*ACCA(PSU)CU

Length

15 nucleotides

Bulged bases

9F1D|1|B5|C|4416

QA status

Modified nucleotides: OMG, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1D|1|B5|A|4368
9F1D|1|B5|OMG|4369
9F1D|1|B5|A|4370
9F1D|1|B5|C|4371
9F1D|1|B5|A|4372
9F1D|1|B5|U|4373
9F1D|1|B5|PSU|4374
9F1D|1|B5|U|4375
*
9F1D|1|B5|A|4415
9F1D|1|B5|C|4416
9F1D|1|B5|C|4417
9F1D|1|B5|A|4418
9F1D|1|B5|PSU|4419
9F1D|1|B5|C|4420
9F1D|1|B5|U|4421

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BB

Ribosomal protein L3

Chain BV

Ribosomal protein L23

Chain BW

Ribosomal protein L24