IL_9F1D_315

3D structure

PDB id

9F1D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK

Experimental method

ELECTRON MICROSCOPY

Resolution

3.26 Å

Loop

Sequence

CCUCUCGGCG*CCCGAAG

Length

17 nucleotides

Bulged bases

9F1D|1|A2|U|748, 9F1D|1|A2|C|749

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1D|1|A2|C|746
9F1D|1|A2|C|747
9F1D|1|A2|U|748
9F1D|1|A2|C|749
9F1D|1|A2|U|750
9F1D|1|A2|C|751
9F1D|1|A2|G|752
9F1D|1|A2|G|753
9F1D|1|A2|C|754
9F1D|1|A2|G|755
*
9F1D|1|A2|C|791
9F1D|1|A2|C|792
9F1D|1|A2|C|793
9F1D|1|A2|G|794
9F1D|1|A2|A|795
9F1D|1|A2|A|796
9F1D|1|A2|G|797

Current chains

Chain A2

18S rRNA

Nearby chains

Chain Ad

40S ribosomal protein S4

Chain Af

40S ribosomal protein S6

Chain Ag

40S ribosomal protein S7

Chain Ak

40S ribosomal protein S11