IL_9F1D_324
3D structure
- PDB id
- 9F1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.26 Å
Loop
- Sequence
- (4AC)G*CA(OMG)
- Length
- 5 nucleotides
- Bulged bases
- 9F1D|1|A2|A|1490
- QA status
- Modified nucleotides: 4AC, OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9F1D_324 not in the Motif Atlas
- Homologous match to IL_8C3A_458
- Geometric discrepancy: 0.1453
- The information below is about IL_8C3A_458
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 112
Unit IDs
9F1D|1|A2|4AC|1338
9F1D|1|A2|G|1339
*
9F1D|1|A2|C|1489
9F1D|1|A2|A|1490
9F1D|1|A2|OMG|1491
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AG
- 40S ribosomal protein S29
- Chain Ab
- Small ribosomal subunit protein uS5
- Chain Ac
- 40S ribosomal protein S3
- Chain Ap
- Small ribosomal subunit protein uS9
- Chain At
- 40S ribosomal protein uS10
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