IL_9FBV_178
3D structure
- PDB id
- 9FBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Escherichia coli ribosome with P-site initiatior tRNA.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- AAUUC*GUUAU
- Length
- 10 nucleotides
- Bulged bases
- 9FBV|1|a|U|846, 9FBV|1|a|U|931
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9FBV_178 not in the Motif Atlas
- Homologous match to IL_5J7L_399
- Geometric discrepancy: 0.2943
- The information below is about IL_5J7L_399
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_96236.1
- Basepair signature
- cWW-tWW-cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
9FBV|1|a|A|844
9FBV|1|a|A|845
9FBV|1|a|U|846
9FBV|1|a|U|847
9FBV|1|a|C|848
*
9FBV|1|a|G|930
9FBV|1|a|U|931
9FBV|1|a|U|932
9FBV|1|a|A|933
9FBV|1|a|U|934
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain y
- Large ribosomal subunit protein uL30
Coloring options: