IL_9FCO_043

3D structure

PDB id

9FCO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E. coli 30S-IF1-IF3-mRNA-Kasugamycin complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CAUG*UGGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FCO|1|B|C|1412
9FCO|1|B|A|1413
9FCO|1|B|U|1414
9FCO|1|B|G|1415
*
9FCO|1|B|U|1485
9FCO|1|B|G|1486
9FCO|1|B|G|1487
9FCO|1|B|G|1488

Current chains

Chain B

16S rRNA

Nearby chains

Chain I

Translation initiation factor IF-1

Chain L

Small ribosomal subunit protein uS12