IL_9FDA_003
3D structure
- PDB id
- 9FDA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E. coli 30S-IF1-IF3-mRNA-Edeine complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2 Å
Loop
- Sequence
- CCUAAC*GGG
- Length
- 9 nucleotides
- Bulged bases
- 9FDA|1|B|C|48, 9FDA|1|B|A|51
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9FDA_003 not in the Motif Atlas
- Geometric match to IL_5J7L_003
- Geometric discrepancy: 0.0685
- The information below is about IL_5J7L_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14177.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
9FDA|1|B|C|47
9FDA|1|B|C|48
9FDA|1|B|U|49
9FDA|1|B|A|50
9FDA|1|B|A|51
9FDA|1|B|C|52
*
9FDA|1|B|G|359
9FDA|1|B|G|360
9FDA|1|B|G|361
Current chains
- Chain B
- 16S rRNA
Nearby chains
- Chain L
- Small ribosomal subunit protein uS12
Coloring options: