IL_9FDA_019

3D structure

PDB id

9FDA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E. coli 30S-IF1-IF3-mRNA-Edeine complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2 Å

Loop

Sequence

UGAAGAAGCCC*GGUUGUAAAG

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FDA|1|B|U|409
9FDA|1|B|G|410
9FDA|1|B|A|411
9FDA|1|B|A|412
9FDA|1|B|G|413
9FDA|1|B|A|414
9FDA|1|B|A|415
9FDA|1|B|G|416
9FDA|1|B|C|417
9FDA|1|B|C|418
9FDA|1|B|C|419
*
9FDA|1|B|G|424
9FDA|1|B|G|425
9FDA|1|B|U|426
9FDA|1|B|U|427
9FDA|1|B|G|428
9FDA|1|B|U|429
9FDA|1|B|A|430
9FDA|1|B|A|431
9FDA|1|B|A|432
9FDA|1|B|G|433

Current chains

Chain B

16S rRNA

Nearby chains

Chain D

Small ribosomal subunit protein uS4