IL_9FQZ_168

3D structure

PDB id

9FQZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

CAAA*UGA(OMC)G

Length

9 nucleotides

Bulged bases

9FQZ|1|S2|A|516

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FQZ|1|S2|C|37
9FQZ|1|S2|A|38
9FQZ|1|S2|A|39
9FQZ|1|S2|A|40
*
9FQZ|1|S2|U|514
9FQZ|1|S2|G|515
9FQZ|1|S2|A|516
9FQZ|1|S2|OMC|517
9FQZ|1|S2|G|518

Current chains

Chain S2

SSU rRNA

Nearby chains

Chain SE

40S ribosomal protein S4, X isoform

Chain SJ

40S ribosomal protein S9