IL_9FQZ_184

3D structure

PDB id

9FQZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

UAUCAA*UGACCACG

Length

14 nucleotides

Bulged bases

9FQZ|1|S2|U|361, 9FQZ|1|S2|C|399, 9FQZ|1|S2|C|400

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FQZ|1|S2|U|359
9FQZ|1|S2|A|360
9FQZ|1|S2|U|361
9FQZ|1|S2|C|362
9FQZ|1|S2|A|363
9FQZ|1|S2|A|364
*
9FQZ|1|S2|U|396
9FQZ|1|S2|G|397
9FQZ|1|S2|A|398
9FQZ|1|S2|C|399
9FQZ|1|S2|C|400
9FQZ|1|S2|A|401
9FQZ|1|S2|C|402
9FQZ|1|S2|G|403

Current chains

Chain S2

SSU rRNA

Nearby chains

Chain SI

40S ribosomal protein S8

Chain SL

40S ribosomal protein S11

Chain SX

40S ribosomal protein S23