3D structure

PDB id
9FQZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1
Experimental method
ELECTRON MICROSCOPY
Resolution
2.85 Å

Loop

Sequence
GAAAAAAUU*ACCGCAGC
Length
17 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9FQZ|1|S2|G|807
9FQZ|1|S2|A|808
9FQZ|1|S2|A|809
9FQZ|1|S2|A|810
9FQZ|1|S2|A|811
9FQZ|1|S2|A|812
9FQZ|1|S2|A|813
9FQZ|1|S2|U|814
9FQZ|1|S2|U|815
*
9FQZ|1|S2|A|849
9FQZ|1|S2|C|850
9FQZ|1|S2|C|851
9FQZ|1|S2|G|852
9FQZ|1|S2|C|853
9FQZ|1|S2|A|854
9FQZ|1|S2|G|855
9FQZ|1|S2|C|856

Current chains

Chain S2
SSU rRNA

Nearby chains

Chain SE
40S ribosomal protein S4, X isoform
Chain SJ
40S ribosomal protein S9
Chain SL
40S ribosomal protein S11
Chain SW
40S ribosomal protein S15a

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.116 s