IL_9FRA_014

3D structure

PDB id

9FRA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-MAP leaderless mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGGGCAAG*CC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FRA|1|2|G|462
9FRA|1|2|G|463
9FRA|1|2|G|464
9FRA|1|2|G|465
9FRA|1|2|C|466
9FRA|1|2|A|467
9FRA|1|2|A|468
9FRA|1|2|G|469
*
9FRA|1|2|C|499
9FRA|1|2|C|500

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain 5

mRNA_Map

Chain D

Small ribosomal subunit protein uS4

Chain F

Small ribosomal subunit protein uS5

Chain e

LSU ribosomal protein S30E (Rps30E)