IL_9FRK_026

3D structure

PDB id

9FRK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to SD mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAGUAG*CUCAGAUCU

Length

15 nucleotides

Bulged bases

9FRK|1|2|A|661

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FRK|1|2|G|642
9FRK|1|2|A|643
9FRK|1|2|G|644
9FRK|1|2|U|645
9FRK|1|2|A|646
9FRK|1|2|G|647
*
9FRK|1|2|C|658
9FRK|1|2|U|659
9FRK|1|2|C|660
9FRK|1|2|A|661
9FRK|1|2|G|662
9FRK|1|2|A|663
9FRK|1|2|U|664
9FRK|1|2|C|665
9FRK|1|2|U|666

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain A

Small ribosomal subunit protein eS1

Chain M

Small ribosomal subunit protein uS11