IL_9FRL_033

3D structure

PDB id

9FRL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to SD mRNA with h44 in up position

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

GG*CAC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FRL|1|2|G|917
9FRL|1|2|G|918
*
9FRL|1|2|C|1189
9FRL|1|2|A|1190
9FRL|1|2|C|1191

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain 4

Transfer RNA; tRNA

Chain O

Small ribosomal subunit protein uS13

Chain T

Small ribosomal subunit protein uS19

Chain c

Small ribosomal subunit protein eS25