IL_9FSF_029

3D structure

PDB id

9FSF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-MAP leaderless mRNA with h44 in up position

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGAGUACG*UGAAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FSF|1|2|G|850
9FSF|1|2|G|851
9FSF|1|2|A|852
9FSF|1|2|G|853
9FSF|1|2|U|854
9FSF|1|2|A|855
9FSF|1|2|C|856
9FSF|1|2|G|857
*
9FSF|1|2|U|868
9FSF|1|2|G|869
9FSF|1|2|A|870
9FSF|1|2|A|871
9FSF|1|2|A|872
9FSF|1|2|C|873

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain N

Small ribosomal subunit protein uS12