IL_9FY0_006

3D structure

PDB id

9FY0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-aIF2beta leaderless mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAUAAC*GAUAAUC

Length

13 nucleotides

Bulged bases

9FY0|1|2|U|154

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FY0|1|2|G|129
9FY0|1|2|A|130
9FY0|1|2|U|131
9FY0|1|2|A|132
9FY0|1|2|A|133
9FY0|1|2|C|134
*
9FY0|1|2|G|149
9FY0|1|2|A|150
9FY0|1|2|U|151
9FY0|1|2|A|152
9FY0|1|2|A|153
9FY0|1|2|U|154
9FY0|1|2|C|155

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain G

Small ribosomal subunit protein eS6