IL_9FY0_014

3D structure

PDB id

9FY0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-aIF2beta leaderless mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGGGCAAG*CC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FY0|1|2|G|462
9FY0|1|2|G|463
9FY0|1|2|G|464
9FY0|1|2|G|465
9FY0|1|2|C|466
9FY0|1|2|A|467
9FY0|1|2|A|468
9FY0|1|2|G|469
*
9FY0|1|2|C|499
9FY0|1|2|C|500

Current chains

Chain 2

rRNA 16S

Nearby chains

Chain D

Small ribosomal subunit protein uS4

Chain F

Small ribosomal subunit protein uS5

Chain e

LSU ribosomal protein S30E (Rps30E)