IL_9G1Z_051
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUCAUCAG*CUCAAG
- Length
- 14 nucleotides
- Bulged bases
- 9G1Z|1|1|U|1187, 9G1Z|1|1|C|1188, 9G1Z|1|1|C|1312, 9G1Z|1|1|A|1314
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G1Z_051 not in the Motif Atlas
- Homologous match to IL_8CRE_054
- Geometric discrepancy: 0.0702
- The information below is about IL_8CRE_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_77278.1
- Basepair signature
- cWW-tWW-L-tWW-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
9G1Z|1|1|C|1183
9G1Z|1|1|U|1184
9G1Z|1|1|C|1185
9G1Z|1|1|A|1186
9G1Z|1|1|U|1187
9G1Z|1|1|C|1188
9G1Z|1|1|A|1189
9G1Z|1|1|G|1190
*
9G1Z|1|1|C|1310
9G1Z|1|1|U|1311
9G1Z|1|1|C|1312
9G1Z|1|1|A|1313
9G1Z|1|1|A|1314
9G1Z|1|1|G|1315
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 0
- 60S ribosomal protein L20
- Chain AN
- Rpl40bp
- Chain q
- Ribosomal 60S subunit protein L9B
- Chain u
- Ribosomal 60S subunit protein L14B
- Chain w
- Ribosomal 60S subunit protein L16A
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