IL_9G1Z_056

3D structure

PDB id

9G1Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAGUG*CUC

Length

8 nucleotides

Bulged bases

9G1Z|1|1|A|1259

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9G1Z_056 not in the Motif Atlas

Homologous match to IL_8P9A_284

Geometric discrepancy: 0.4251

The information below is about IL_8P9A_284

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_36931.2

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

24

Unit IDs

9G1Z|1|1|G|1258
9G1Z|1|1|A|1259
9G1Z|1|1|G|1260
9G1Z|1|1|U|1261
9G1Z|1|1|G|1262
*
9G1Z|1|1|C|1271
9G1Z|1|1|U|1272
9G1Z|1|1|C|1273

Current chains

Chain 1

25S rRNA

Nearby chains