IL_9G1Z_079
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAAGUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G1Z_079 not in the Motif Atlas
- Geometric match to IL_8P9A_305
- Geometric discrepancy: 0.0655
- The information below is about IL_8P9A_305
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.1
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 10
Unit IDs
9G1Z|1|1|G|1894
9G1Z|1|1|G|1895
9G1Z|1|1|A|1896
9G1Z|1|1|A|1897
9G1Z|1|1|G|1898
9G1Z|1|1|U|1899
9G1Z|1|1|C|1900
9G1Z|1|1|G|1901
9G1Z|1|1|G|1902
*
9G1Z|1|1|C|2311
9G1Z|1|1|U|2312
9G1Z|1|1|G|2313
9G1Z|1|1|U|2314
9G1Z|1|1|C|2315
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 6
- Ribosomal 60S subunit protein L23B
- Chain k
- 60S ribosomal protein L3
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