IL_9G1Z_201
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUC*GUU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G1Z_201 not in the Motif Atlas
- Homologous match to IL_8CRE_448
- Geometric discrepancy: 0.0637
- The information below is about IL_8CRE_448
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.4
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 215
Unit IDs
9G1Z|1|A|G|1198
9G1Z|1|A|U|1199
9G1Z|1|A|C|1200
*
9G1Z|1|A|G|1434
9G1Z|1|A|U|1435
9G1Z|1|A|U|1436
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain L
- Ribosomal 40S subunit protein S10A
- Chain Q
- Ribosomal 40S subunit protein S15
- Chain e
- Ribosomal 40S subunit protein S29A
- Chain g
- Ubiquitin-ribosomal 40S subunit protein S31 fusion protein
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