IL_9G1Z_221
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGCU*AAAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9G1Z_221 not in the Motif Atlas
- Geometric match to IL_8CRE_111
- Geometric discrepancy: 0.3384
- The information below is about IL_8CRE_111
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_68909.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
9G1Z|1|A|C|1631
9G1Z|1|A|G|1632
9G1Z|1|A|C|1633
9G1Z|1|A|U|1634
*
9G1Z|1|A|A|1740
9G1Z|1|A|A|1741
9G1Z|1|A|A|1742
9G1Z|1|A|A|1743
9G1Z|1|A|G|1744
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain AO
- 60S ribosomal protein L41
- Chain Y
- Ribosomal 40S subunit protein S23B
Coloring options: