IL_9G5B_027

3D structure

PDB id

9G5B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit (State A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUUGCUCAG*CCCAUG

Length

15 nucleotides

Bulged bases

9G5B|1|A|C|1250

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9G5B|1|A|C|1244
9G5B|1|A|U|1245
9G5B|1|A|U|1246
9G5B|1|A|G|1247
9G5B|1|A|C|1248
9G5B|1|A|U|1249
9G5B|1|A|C|1250
9G5B|1|A|A|1251
9G5B|1|A|G|1252
*
9G5B|1|A|C|1340
9G5B|1|A|C|1341
9G5B|1|A|C|1342
9G5B|1|A|A|1343
9G5B|1|A|U|1344
9G5B|1|A|G|1345

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain D

28S ribosomal protein S5, mitochondrial

Chain K

28S ribosomal protein S14, mitochondrial

Chain Z

28S ribosomal protein S33, mitochondrial