IL_9GGR_035

3D structure

PDB id

9GGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the HrpA-bound E. coli disome, Class II

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGUAGC*GCGUAGAGA

Length

15 nucleotides

Bulged bases

9GGR|1|0|A|702

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GGR|1|0|U|684
9GGR|1|0|G|685
9GGR|1|0|U|686
9GGR|1|0|A|687
9GGR|1|0|G|688
9GGR|1|0|C|689
*
9GGR|1|0|G|698
9GGR|1|0|C|699
9GGR|1|0|G|700
9GGR|1|0|U|701
9GGR|1|0|A|702
9GGR|1|0|G|703
9GGR|1|0|A|704
9GGR|1|0|G|705
9GGR|1|0|A|706

Current chains

Chain 0

16S ribosomal RNA

Nearby chains

Chain D

Small ribosomal subunit protein uS11

Chain N

Large subunit ribosomal RNA; LSU rRNA