IL_9GGR_128
3D structure
- PDB id
- 9GGR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GGR_128 not in the Motif Atlas
- Homologous match to IL_4LFB_070
- Geometric discrepancy: 0.3672
- The information below is about IL_4LFB_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_29925.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
9GGR|1|AA|C|1407
9GGR|1|AA|A|1408
9GGR|1|AA|C|1409
*
9GGR|1|AA|G|1491
9GGR|1|AA|A|1492
9GGR|1|AA|A|1493
9GGR|1|AA|G|1494
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain A3
- Transfer RNA; tRNA
- Chain AV
- Large subunit ribosomal RNA; LSU rRNA
- Chain w
- messenger RNA
- Chain z
- Small ribosomal subunit protein uS12
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