IL_9GGR_167
3D structure
- PDB id
- 9GGR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 9GGR|1|AV|A|1156
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9GGR_167 not in the Motif Atlas
- Homologous match to IL_5J7L_277
- Geometric discrepancy: 0.1343
- The information below is about IL_5J7L_277
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_38507.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
9GGR|1|AV|C|998
9GGR|1|AV|U|999
9GGR|1|AV|A|1000
9GGR|1|AV|A|1001
9GGR|1|AV|G|1002
*
9GGR|1|AV|C|1153
9GGR|1|AV|G|1154
9GGR|1|AV|A|1155
9GGR|1|AV|A|1156
9GGR|1|AV|G|1157
Current chains
- Chain AV
- 23S ribosomal RNA
Nearby chains
- Chain AW
- 5S ribosomal RNA; 5S rRNA
- Chain Al
- Large ribosomal subunit protein bL20
- Chain Am
- Large ribosomal subunit protein bL21
- Chain Au
- Large ribosomal subunit protein uL30
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