3D structure

PDB id
9GGR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the HrpA-bound E. coli disome, Class II
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CCCAGACAG*UCGAG
Length
14 nucleotides
Bulged bases
9GGR|1|AV|A|1046
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9GGR|1|AV|C|1043
9GGR|1|AV|C|1044
9GGR|1|AV|C|1045
9GGR|1|AV|A|1046
9GGR|1|AV|G|1047
9GGR|1|AV|A|1048
9GGR|1|AV|C|1049
9GGR|1|AV|A|1050
9GGR|1|AV|G|1051
*
9GGR|1|AV|U|1108
9GGR|1|AV|C|1109
9GGR|1|AV|G|1110
9GGR|1|AV|A|1111
9GGR|1|AV|G|1112

Current chains

Chain AV
23S ribosomal RNA

Nearby chains

Chain Ab
Large ribosomal subunit protein uL6

Coloring options:

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