IL_9GGR_222

3D structure

PDB id

9GGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the HrpA-bound E. coli disome, Class II

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAG*CGACCUUGAAAUAC

Length

18 nucleotides

Bulged bases

9GGR|1|AV|A|2163, 9GGR|1|AV|U|2172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GGR|1|AV|G|2124
9GGR|1|AV|G|2125
9GGR|1|AV|A|2126
9GGR|1|AV|G|2127
*
9GGR|1|AV|C|2161
9GGR|1|AV|G|2162
9GGR|1|AV|A|2163
9GGR|1|AV|C|2164
9GGR|1|AV|C|2165
9GGR|1|AV|U|2166
9GGR|1|AV|U|2167
9GGR|1|AV|G|2168
9GGR|1|AV|A|2169
9GGR|1|AV|A|2170
9GGR|1|AV|A|2171
9GGR|1|AV|U|2172
9GGR|1|AV|A|2173
9GGR|1|AV|C|2174

Current chains

Chain AV

23S ribosomal RNA

Nearby chains

Chain AK

Large ribosomal subunit protein uL1